BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H01SP1|AL426103
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 460 e-129
>3x_Contig1713
Length = 18539
Score = 460 bits (211), Expect = e-129
Identities = 218/219 (99%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 569 ccccttcgaacctccaaaaccaaagacgaaacataaattggatatttcaaacgttaaaga 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12178 ccccttcgaacctccaaaaccaaagacgaaacataaattggatatttcaaacgttaaaga 12237
Query: 629 attcgaactgttacagaagtacgaattggataaattcaaagagatgatcgatctagtcaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12238 attcgaactgttacagaagtacgaattggataaattcaaagagatgatcgatctagtcaa 12297
Query: 689 gaaatcaggtgctaacgttgtcatctgccaatggggggttcgatgatgaggctaaccatt 748
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 12298 gaaatcaggtgctaacgttgtcatctgccaat-gggggttcgatgatgaggctaaccatt 12356
Query: 749 tactcttgcaaaacgaattaccagctgttagatgggttg 787
|||||||||||||||||||||||||||||||||||||||
Sbjct: 12357 tactcttgcaaaacgaattaccagctgttagatgggttg 12395
Score = 124 bits (57), Expect = 2e-28
Identities = 163/217 (75%), Gaps = 2/217 (0%)
Strand = Plus / Plus
Query: 1 ccatcactaacgatggtgccaccattctttccagaatggaattggmtaacgacatcagac 60
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |
Sbjct: 11613 ccatcactaacgatggtgccaccattctttccagaatggaattggataacgaaatc-gcc 11671
Query: 61 aagyygtcggycccmtysyccmggycgccggccgatgacmttggygatggcccccccggc 120
||| || || || | || || ||| || |||||| |||| ||||| || ||||
Sbjct: 11672 aagttgttggtccaattgtccaggtcgcaggacgatgaaattggtgatggtaccaccgg- 11730
Query: 121 cgtcgycgtccyascytgtsccttgtyggcyccascgtyagaytygaycgagamasgcgt 180
|| | ||| | | | ||| |||||| || | | ||| ||| | || ||||| | | ||
Sbjct: 11731 tgttgtcgtactagcttgtgccttgttggatcaagcgttagatttgatcgagaaaggtgt 11790
Query: 181 ccacccgattmasmycgccaatsggtttgccmaggct 217
|| |||||| | ||| ||| |||||| | |||||
Sbjct: 11791 tcatccgattaagatcgctaatgggtttgacaaggct 11827
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.51 0.732 1.42
Gapped
Lambda K H
1.51 0.732 1.42
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2326
Number of Sequences: 1807
Number of extensions: 2326
Number of successful extensions: 174
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 15
effective length of query: 772
effective length of database: 10,331,446
effective search space: 7975876312
effective search space used: 7975876312
T: 0
A: 40
X1: 5 (10.9 bits)
X2: 13 (28.4 bits)
S1: 11 (24.4 bits)
S2: 46 (100.8 bits)